Where do plugins installed in Geneious appear?

There are a wide range of plugins available in Geneious.  These plugins offer additional functionality and can be installed through the Plugins menu (Tools→Plugins).  

The location of a plugin in Geneious once it is installed will depend upon the function of the plugin.  For example, the plugins for tree builders (eg. Phyml, Paup* and MrBayes) will appear as options in the "Tree" menu, whilst the GenBank submission plugin is available through the Tools menu (Tools→Submit to GenBank).  Other plugins are tied to a particular document type and the functions will appear when you open a file of that type.  For example, the microsatellite functions will appear when you open a microsatellite document in Geneious.

 

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